STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
axin1Axin 1. (854 aa)    
Predicted Functional Partners:
csnk1a1
Casein kinase 1, alpha 1; Belongs to the protein kinase superfamily.
    
 0.988
ctnnb1
Catenin (cadherin-associated protein), beta 1.
   
 0.988
dvl2
Dishevelled segment polarity protein 2.
   
 0.983
apc
APC regulator of WNT signaling pathway.
   
 0.982
LOC101171502
Uncharacterized protein.
   
 0.978
dvl3
Dishevelled segment polarity protein 3a.
   
0.975
dvl1
Dishevelled segment polarity protein 1a.
   
 0.975
LOC105356509
Casein kinase 1, epsilon; Belongs to the protein kinase superfamily.
    
 0.949
gsk3b
Glycogen synthase kinase 3 beta, genome duplicate a.
   
 0.933
apc2
APC regulator of WNT signaling pathway 2.
   
 0.917
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.