Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
zfatUncharacterized protein. (1133 aa)    
Predicted Functional Partners:
ncapg
Non-SMC condensin I complex, subunit G.
    
 
 0.766
tcf7
Transcription factor 7.
    
 
 0.755
egf
Epidermal growth factor.
     
 0.754
LOC101167158
Growth hormone secretagogue receptor b; Belongs to the G-protein coupled receptor 1 family.
    
 0.741
LOC111948766
Uncharacterized protein.
      
 0.671
LOC101155422
Uncharacterized protein.
      
 0.644
stk11
Serine/threonine kinase 11; Belongs to the protein kinase superfamily.
    
 0.620
magi2
Membrane associated guanylate kinase, WW and PDZ domain containing 2a.
      
 0.599
LOC101173221
Membrane associated guanylate kinase, WW and PDZ domain containing 2b.
      
 0.599
blcap
Bladder cancer associated protein.
      
 0.593
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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