Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
nat10RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein THUMPD1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. (1037 aa)    
Predicted Functional Partners:
nol10
Nucleolar protein 10.
   
 
 0.997
aatf
Apoptosis antagonizing transcription factor.
   
 
 0.996
rrp12
Ribosomal RNA processing 12 homolog.
   
 
 0.994
H2MCJ8_ORYLA
Programmed cell death 11.
   
 
 0.993
bms1
BMS1 ribosome biogenesis factor.
   
 
 0.993
LOC101167684
PWP2 small subunit processome component.
   
 
 0.992
nop58
NOP58 ribonucleoprotein homolog (yeast).
   
 
 0.991
wdr36
WD repeat domain 36.
   
 
 0.991
utp20
UTP20 small subunit processome component.
   
 
 0.990
tbl3
Transducin (beta)-like 3.
   
 
 0.990
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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