STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101167242Leucine-rich repeat LGI family, member 2a. (613 aa)    
Predicted Functional Partners:
adam23
ADAM metallopeptidase domain 23.
     
 0.887
ADAM11
ADAM metallopeptidase domain 11.
     
 0.685
adam22
ADAM metallopeptidase domain 22.
     
 0.685
LOC101159950
Uncharacterized protein.
     
 0.685
fbxl17
F-box and leucine-rich repeat protein 17.
   
 
 0.603
zcchc4
Zinc finger, CCHC domain containing 4.
      
 0.507
H2MFT6_ORYLA
Uncharacterized protein.
    
   0.488
LOC101160234
Bromo domain-containing protein.
    
 0.463
arsg
Arylsulfatase G.
      
 0.410
LOC101169556
ADAM metallopeptidase domain 12.
     
 0.404
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.