Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MPEG1Macrophage expressed 1. (730 aa)    
Predicted Functional Partners:
lyz
Lysozyme; Lysozymes have primarily a bacteriolytic function; those in tissues and body fluids are associated with the monocyte-macrophage system and enhance the activity of immunoagents. Belongs to the glycosyl hydrolase 22 family.
   
  
 0.661
plekha8
Pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8.
      
 0.539
spi1
Spi-1 proto-oncogene b.
   
  
 0.508
LOC101167041
Uncharacterized protein.
      
 0.477
LOC101155297
Chemokine (C-X-C motif) receptor 3, tandem duplicate 2; Belongs to the G-protein coupled receptor 1 family.
   
  
 0.471
scarb1
Scavenger receptor class B, member 1; Belongs to the CD36 family.
   
  
 0.467
lck
Tyrosine-protein kinase.
   
  
 0.431
LOC101171684
Myeloid-specific peroxidase.
      
 0.412
ENSORLP00000040425
Myeloid-specific peroxidase.
      
 0.412
gpnmb
Glycoprotein (transmembrane) nmb.
   
  
 0.403
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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