STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2LJC9_ORYLAProprotein convertase subtilisin/kexin type 5a. (1036 aa)    
Predicted Functional Partners:
mbtps1
Membrane-bound transcription factor peptidase, site 1.
      
 0.645
rxfp2
Relaxin family peptide receptor 2a.
   
 0.543
rxfp1
Relaxin family peptide receptor 1.
   
 0.543
lgr5
G_PROTEIN_RECEP_F1_2 domain-containing protein.
   
 0.543
lgr4
Leucine-rich repeat containing G protein-coupled receptor 4.
   
 0.543
VSTM2A
V-set and transmembrane domain containing 2A.
      
 0.504
LOC105354150
V-set and transmembrane domain containing 2 like.
   
  
 0.499
vstm2l
V-set and transmembrane domain containing 2 like.
   
  
 0.499
LOC101157631
Transforming growth factor beta; Belongs to the TGF-beta family.
    
 0.496
GNAS
Uncharacterized protein.
      
 0.459
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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