STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101158271Tyrosine-protein kinase. (447 aa)    
Predicted Functional Partners:
pag1
Phosphoprotein membrane anchor with glycosphingolipid microdomains 1.
    
 0.898
LOC101162652
FERM domain-containing protein.
 
 
 0.821
SRC
Tyrosine-protein kinase.
  
0.710
LOC101164480
Tyrosine-protein kinase.
  
0.710
LOC101171047
Uncharacterized protein.
   
 0.705
LOC101159014
Protein tyrosine phosphatase non-receptor type 22.
   
 0.705
LOC101159564
Protein tyrosine phosphatase non-receptor type 18.
   
 0.705
lck
Tyrosine-protein kinase.
  
0.689
esr1
Estrogen receptor; The steroid hormones and their receptors are involved in the regulation of eukaryotic gene expression and affect cellular proliferation and differentiation in target tissues.
    
 0.685
LOC101157047
Leupaxin.
   
 0.662
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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