Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
TNFRSF11BTNF receptor superfamily member 11b. (416 aa)    
Predicted Functional Partners:
LOC101161466
TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family.
    
 0.788
acp5
Tartrate-resistant acid phosphatase type 5.
   
  
 0.758
LOC101172593
Tumor necrosis factor a (TNF superfamily, member 2).
   
 0.729
LOC101167049
CD40 ligand; Belongs to the tumor necrosis factor family.
    
 0.702
ENSORLP00000036355
Uncharacterized protein.
      
 0.693
LOC101159531
Tumor necrosis factor b (TNF superfamily, member 2).
   
 0.689
tnfrsf11a
Tumor necrosis factor receptor superfamily, member 11a, NFKB activator.
   
 0.639
LOC101172518
Dickkopf WNT signaling pathway inhibitor 1a.
    
 0.609
traf6
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.602
ENSORLP00000036680
Ig-like domain-containing protein.
   
 0.601
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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