Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
pank4Pantothenate kinase. (769 aa)    
Predicted Functional Partners:
ppcs
Phosphopantothenoylcysteine synthetase.
     
 0.940
coasy
CoA synthase.
      
 0.914
H2MFT6_ORYLA
Uncharacterized protein.
   
   0.812
LOC101166047
Glutamate receptor, metabotropic 3.
    
 
 0.806
GPR139
G protein-coupled receptor 139.
      
 0.799
LOC101174805
Amyloid beta (A4) precursor protein-binding, family B, member 2b.
    
 
 0.734
LOC101173072
Uncharacterized protein.
    
 
 0.731
LOC101170553
NME/NM23 family member 8; Belongs to the NDK family.
    
 
 0.729
rrp8
Ribosomal RNA-processing protein 8; Probable methyltransferase required to silence rDNA. Belongs to the methyltransferase superfamily. RRP8 family.
      
 0.724
CRHR2
Corticotropin releasing hormone receptor 2; Belongs to the G-protein coupled receptor 2 family.
      
 0.723
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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