STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101172343Nuclear factor, erythroid 2-like 3. (636 aa)    
Predicted Functional Partners:
MAFG
MAF bZIP transcription factor G.
   
 0.798
LOC101173788
V-maf avian musculoaponeurotic fibrosarcoma oncogene homolog Ga.
   
 0.798
mafk
V-maf avian musculoaponeurotic fibrosarcoma oncogene homolog K.
   
 0.719
cul1
Cullin 1b; Belongs to the cullin family.
    
 0.602
katnal2
Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.
   
 
 0.600
LOC105356510
V-maf avian musculoaponeurotic fibrosarcoma oncogene homolog F.
   
 0.594
LOC101172920
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.589
CUL3
Cullin 3; Belongs to the cullin family.
    
 0.589
nrf1
Nuclear respiratory factor 1.
    
 
 0.581
LOC101168720
Glycogen synthase kinase 3 alpha a; Belongs to the protein kinase superfamily.
    
 0.572
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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