STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101172343Nuclear factor, erythroid 2-like 3. (636 aa)    
Predicted Functional Partners:
mafk
V-maf avian musculoaponeurotic fibrosarcoma oncogene homolog K.
    
 0.841
MAFG
MAF bZIP transcription factor G.
    
 0.824
LOC101173788
V-maf avian musculoaponeurotic fibrosarcoma oncogene homolog Ga.
    
 0.824
nrf1
Nuclear respiratory factor 1.
    
 
 0.743
dcaf11
DDB1- and CUL4-associated factor 11; May function as a substrate receptor for CUL4-DDB1 E3 ubiquitin-protein ligase complex; Belongs to the WD repeat LEC14B family.
    
 0.730
gsk3b
Glycogen synthase kinase 3 beta, genome duplicate a.
   
 0.703
LOC101168720
Glycogen synthase kinase 3 alpha a; Belongs to the protein kinase superfamily.
   
 0.695
LOC101160344
Glycogen synthase kinase 3 alpha b; Belongs to the protein kinase superfamily.
   
 0.695
LOC101172920
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.690
CUL3
Cullin 3; Belongs to the cullin family.
    
 0.690
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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