Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
cdkal1CDK5 regulatory subunit associated protein 1-like 1. (573 aa)    
Predicted Functional Partners:
mms19
MMS19 homolog, cytosolic iron-sulfur assembly component.
   
 
 0.964
ciao1
Probable cytosolic iron-sulfur protein assembly protein CIAO1; Key component of the cytosolic iron-sulfur protein assembly (CIA) complex, a multiprotein complex that mediates the incorporation of iron-sulfur cluster into extramitochondrial Fe/S proteins. Belongs to the WD repeat CIA1 family.
    
 
 0.926
AIFM2
Apoptosis inducing factor mitochondria associated 2.
      
 0.902
tmlhe
Trimethyllysine hydroxylase, epsilon.
      
 0.891
fto
FTO alpha-ketoglutarate dependent dioxygenase.
      
 0.780
ciao2b
Cytosolic iron-sulfur assembly component 2B.
    
 
 0.780
hhex
Homeobox domain-containing protein.
      
 0.755
urod
Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family.
  
 
 0.702
slc30a8
Solute carrier family 30 member 8.
      
 0.689
ankle2
Ankyrin repeat and LEM domain containing 2.
     
 0.686
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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