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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
trmt10ctRNA methyltransferase 10C, mitochondrial RNase P subunit. (506 aa)    
Predicted Functional Partners:
hsd17b10
Hydroxysteroid (17-beta) dehydrogenase 10; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
 0.994
prorp
Protein only RNase P catalytic subunit.
   
 0.983
elac2
ElaC ribonuclease Z 2.
   
 
 0.935
trmt6
tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6; Substrate-binding subunit of tRNA (adenine-N1-)- methyltransferase, which catalyzes the formation of N1-methyladenine at position 58 (m1A58) in initiator methionyl-tRNA.
   
  
 0.918
trmt61b
tRNA methyltransferase 61B.
   
  
 0.908
rpf1
Ribosome production factor 1 homolog.
   
  
 0.902
trnt1
tRNA nucleotidyl transferase, CCA-adding, 1; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.
   
 
 0.867
LOC101160053
G-rich RNA sequence binding factor 1.
   
 
 0.834
mrps31
Mitochondrial ribosomal protein S31.
   
 
 0.833
ENSORLP00000029432
Mitochondrial ribosomal protein S5.
   
 
 0.807
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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