Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
glmnGlomulin, FKBP associated protein a. (588 aa)    
Predicted Functional Partners:
H2MCJ8_ORYLA
Programmed cell death 11.
   
 0.969
nop14
NOP14 nucleolar protein homolog (yeast).
   
 0.959
wdr75
WD repeat domain 75.
   
 0.955
utp4
UTP4 small subunit processome component.
   
 0.953
nol6
Nucleolar protein 6.
   
 0.944
H2MDY1_ORYLA
BP28CT domain-containing protein.
   
 0.941
Heatr1
Uncharacterized protein.
   
 0.941
bms1
BMS1 ribosome biogenesis factor.
   
 0.940
wdr36
WD repeat domain 36.
   
 0.937
utp15
UTP15 small subunit processome component.
   
 0.933
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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