Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC101165330Glia maturation factor; Belongs to the actin-binding proteins ADF family. GMF subfamily. (142 aa)    
Predicted Functional Partners:
twf1
Twinfilin actin-binding protein 1a.
   
 
 0.895
actr2
Actin-related protein 2; ATP-binding component of the Arp2/3 complex, a multiprotein complex that mediates actin polymerization upon stimulation by nucleation-promoting factor (NPF). The Arp2/3 complex mediates the formation of branched actin networks in the cytoplasm, providing the force for cell motility. Seems to contact the pointed end of the daughter actin filament.
   
 
 0.695
LOC101157161
Zgc:101810; Belongs to the actin family.
   
 
 0.695
fut4
Alpha3-fucosyltransferase.
      
 0.656
fut9a
Alpha3-fucosyltransferase.
      
 0.656
fut9c
Alpha3-fucosyltransferase.
      
 0.656
fut7
Alpha3-fucosyltransferase.
      
 0.614
LOC101155832
Uncharacterized protein; Belongs to the actin family.
   
 
 0.601
LOC101158395
Actin related protein 3; Belongs to the actin family.
   
 
 0.601
LOC101162164
Actin related protein 3B; Belongs to the actin family.
   
 
 0.601
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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