Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
waplWAPL cohesin release factor a. (1177 aa)    
Predicted Functional Partners:
smc3
Structural maintenance of chromosomes protein.
   
 0.976
pds5b
PDS5 cohesin associated factor B.
   
 0.924
cdca5
Cell division cycle associated 5.
    
 0.923
rad21
Uncharacterized protein.
    
 0.917
pds5a
PDS5 cohesin associated factor A.
   
 0.903
ENSORLP00000031561
WAPL cohesin release factor b.
  
  
 
0.901
LOC101173147
RAD21 cohesin complex component like 1.
    
 0.871
smc1b
Structural maintenance of chromosomes protein.
   
 0.867
smc1a
Structural maintenance of chromosomes protein.
   
 0.867
RBM20
RNA binding motif protein 20.
   
 0.862
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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