Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cenpqUncharacterized protein. (289 aa)    
Predicted Functional Partners:
H2MZX5_ORYLA
Centromere protein P.
   
 0.999
cenpn
Centromere protein N.
   
 0.997
cenpm
Proliferation associated nuclear element.
    
 0.997
cenpk
Centromere protein K.
   
 0.994
cenpi
Centromere protein I.
   
 0.993
cenpw
Uncharacterized protein.
   
 
 0.969
cenpx
Uncharacterized protein.
    
 0.961
CENPS
Centromere protein S.
   
 0.927
LOC101173302
Cortistatin.
   
 0.927
mei4
Uncharacterized protein.
      
 0.914
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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