STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101165719Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily. (1143 aa)    
Predicted Functional Partners:
phyhip
Uncharacterized protein.
      
 0.570
LOC101159585
ATPase H+ transporting accessory protein 1 like b.
      
 0.563
tmem30a
Cell cycle control protein; Belongs to the CDC50/LEM3 family.
    
 0.560
LOC101166445
Cell cycle control protein; Belongs to the CDC50/LEM3 family.
    
 0.501
LOC101172542
Cell cycle control protein; Belongs to the CDC50/LEM3 family.
    
 0.488
tmem64
Transmembrane protein 64.
     
 0.466
fbxl16
F-box and leucine-rich repeat protein 16.
      
 0.464
ccdc103
Dynein_attach_N domain-containing protein.
    
 0.431
ATP9A
Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.
    
 0.431
atp9b
Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.
    
 0.431
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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