Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
oaz1Ornithine decarboxylase antizyme 1a. (202 aa)    
Predicted Functional Partners:
odc1
Ornithine decarboxylase 1; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
    
 0.978
azin1
Antizyme inhibitor 1a; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
    
 0.923
LOC101162142
Antizyme inhibitor 1b; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
    
 0.923
dot1l
Histone-lysine N-methyltransferase, H3 lysine-79 specific.
   
  
 0.737
rpl27
60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.
   
  
 0.733
rpl8
60S ribosomal protein L8.
   
  
 0.731
eef1g
Eukaryotic translation elongation factor 1 gamma.
   
  
 0.725
rpl32
Ribosomal protein L32.
   
  
 0.725
tpt1
Translationally-controlled tumor protein; Belongs to the TCTP family.
   
    0.724
LOC101170879
Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.
   
  
 0.711
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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