Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
n6amt1N-6 adenine-specific DNA methyltransferase 1. (218 aa)    
Predicted Functional Partners:
trmt112
tRNA methyltransferase subunit 11-2.
    
 0.998
mettl4
Methyltransferase like 4; Belongs to the MT-A70-like family.
      
 0.952
trmt11
tRNA methyltransferase 11 homolog.
    
 
 0.935
etf1
Eukaryotic translation termination factor 1b.
    
 0.915
mtrf1
Mitochondrial translational release factor 1.
  
 
 0.898
as3mt
Arsenite methyltransferase.
      
 0.826
alkbh4
AlkB homolog 4, lysine demthylase.
      
 0.821
LOC101167832
Arylsulfatase H.
      
 0.812
mtrf1l
Mitochondrial translational release factor 1-like.
  
 
 0.801
alkbh1
AlkB homolog 1, histone H2A dioxygenase.
      
 0.765
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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