Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101172801Ephrin RBD domain-containing protein; Belongs to the ephrin family. (342 aa)    
Predicted Functional Partners:
epha10
Uncharacterized protein.
   
 0.764
ephb3
Receptor protein-tyrosine kinase.
   
 0.764
LOC101173092
EPH receptor B1.
   
 0.762
nck1
Cytoplasmic protein.
    
 0.744
nck2
Cytoplasmic protein.
    
 0.744
epha4
Eph receptor A4, like.
   
 0.732
ephb4
Eph receptor B4a.
   
 0.732
epha5
Uncharacterized protein.
   
 0.730
epha3
Eph receptor A3.
   
 0.730
epha8
Uncharacterized protein.
   
 0.691
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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