Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
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[Homology]
Score
sqorSulfide quinone oxidoreductase. (438 aa)    
Predicted Functional Partners:
ethe1
ETHE1 persulfide dioxygenase.
  
 
 0.998
suox
Sulfite oxidase.
   
 0.929
selenbp1
Selenium binding protein 1.
     
 0.911
nudcd1
NudC domain containing 1.
    
   0.786
smpdl3a
Acid sphingomyelinase-like phosphodiesterase.
      
 0.737
thoc5
THO complex 5.
      
 0.707
sardh
Sarcosine dehydrogenase.
    
 0.651
dao
D-amino-acid oxidase, tandem duplicate 2.
  
 0.641
chdh
Choline dehydrogenase.
     
 0.637
cth
Cystathionase (cystathionine gamma-lyase), like.
  
  
 0.623
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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