Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
dnajc9DnaJ (Hsp40) homolog, subfamily C, member 9. (255 aa)    
Predicted Functional Partners:
mcm2
DNA helicase; Belongs to the MCM family.
   
 
 0.824
nudcd1
NudC domain containing 1.
    
   0.786
dnajc27
DnaJ (Hsp40) homolog, subfamily C, member 27.
    
 0.782
dnajc28
DnaJ (Hsp40) homolog, subfamily C, member 28.
      
 0.761
dnajc1
DnaJ (Hsp40) homolog, subfamily C, member 1.
   
 0.741
dnajc8
DnaJ (Hsp40) homolog, subfamily C, member 8.
   
  
 0.738
hspa5
Uncharacterized protein; Belongs to the heat shock protein 70 family.
 
 0.714
dnajc24
Uncharacterized protein.
   
  
 0.709
dnajc25
DnaJ (Hsp40) homolog, subfamily C, member 25.
      
0.701
mrps16
Mitochondrial ribosomal protein S16.
   
 
 0.691
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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