Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
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[Homology]
Score
slc6a3Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family. (623 aa)    
Predicted Functional Partners:
snca
Uncharacterized protein; Belongs to the synuclein family.
    
 
 0.870
LOC101171005
Nuclear factor of activated T cells 2a.
      
 0.710
LPCAT1
Lysophosphatidylcholine acyltransferase 1.
      
 0.669
ENO2
Enolase 2.
      
 0.612
LOC101165077
Enolase 2.
      
 0.612
th
Tyrosine hydroxylase 1.
   
  
 0.582
pick1
Protein interacting with prkca 1.
    
 
 0.562
CLPTM1L
CLPTM1 like.
      
 0.512
clptm1
CLPTM1 regulator of GABA type A receptor forward trafficking.
      
 0.512
comt
Catechol-O-methyltransferase b.
      
 0.499
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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