STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fkbp8Peptidylprolyl isomerase. (401 aa)    
Predicted Functional Partners:
bcl2
BCL2 apoptosis regulator b.
   
 
 0.767
LOC101169506
Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 2.
   
 0.687
hsp90ab1
Heat shock protein 90, alpha (cytosolic), class B member 1.
   
 0.687
rptor
Regulatory associated protein of MTOR, complex 1.
    
 
 0.676
usp30
Ubiquitin carboxyl-terminal hydrolase.
    
 0.674
dot1l
Histone-lysine N-methyltransferase, H3 lysine-79 specific.
    
 
 0.663
mlst8
MTOR associated protein, LST8 homolog (S. cerevisiae).
   
 
 0.645
trap1
TNF receptor-associated protein 1.
   
 0.629
tsc1
TSC complex subunit 1b.
   
 0.629
ENSORLP00000031311
Uncharacterized protein.
   
 0.629
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.