Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
rexo2Small fragment nuclease. (308 aa)    
Predicted Functional Partners:
rexo1
REX1, RNA exonuclease 1 homolog.
   
 0.949
REXO5
RNA exonuclease 5.
   
 0.949
ENSORLP00000033233
Uncharacterized protein.
   
 0.949
blm
Uncharacterized protein.
      
 0.870
eri1
Exoribonuclease 1.
   
  
 0.687
exo1
Exonuclease 1.
   
  
 0.631
ssbp1
Single-stranded DNA binding protein 1.
  
 
 0.621
rexo4
REX4 homolog, 3'-5' exonuclease.
   
 
 0.621
eri2
ERI1 exoribonuclease family member 2.
   
  
 0.588
mroh1
Maestro heat-like repeat family member 1.
      
 0.579
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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