STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc35g1Solute carrier family 35 member G1. (411 aa)    
Predicted Functional Partners:
plce1
Phospholipase C, epsilon 1.
    
 
 0.671
slc35c1
Solute carrier family 35 member C1.
   
  
 0.612
slc35e1
Solute carrier family 35 member E1.
      
 0.560
slc35e3
Solute carrier family 35 member E3.
      
 0.559
slc35b2
Solute carrier family 35 member B2.
      
 0.511
LOC101172259
Zgc:113149.
      
 0.483
INPP5A
Inositol polyphosphate-5-phosphatase A.
      
 0.448
LOC101171587
Inositol polyphosphate-5-phosphatase L.
      
 0.448
noc3l
Nucleolar complex protein 3 homolog.
   
  
 0.405
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.