Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101168447BTB domain-containing protein. (514 aa)    
Predicted Functional Partners:
LOC101172920
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.824
CUL3
Cullin 3; Belongs to the cullin family.
    
 0.824
fbxl17
F-box and leucine-rich repeat protein 17.
    
 0.690
H2MG95_ORYLA
Ring-box 1, E3 ubiquitin protein ligase.
    
 0.684
klhl26
Kelch-like family member 26.
    
 0.674
nanp
N-acetylneuraminic acid phosphatase.
   
 
 0.656
ubxn7
UBX domain protein 7.
    
  0.642
LOC101161115
TIP120 domain-containing protein.
     
 0.638
cand1
Cullin-associated and neddylation-dissociated 1.
     
 0.638
LOC101175526
Radial spoke head 3.
   
   0.611
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.