STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101159773Scinderin like b. (720 aa)    
Predicted Functional Partners:
LOC101158206
Uncharacterized protein.
  
  
 
0.902
gsn
Gelsolin a.
  
  
 
0.901
cog8
Component of oligomeric golgi complex 8.
    
 
 0.663
pikfyve
Phosphoinositide kinase, FYVE finger containing.
     
 0.652
LOC101173218
Phosphatidylinositol-5-phosphate 4-kinase, type II, gamma b.
     
  0.650
LOC101169535
Phosphatidylinositol-5-phosphate 4-kinase, type II, gamma a.
     
  0.650
LOC101163663
Phosphatidylinositol-4-phosphate 5-kinase, type I, beta b.
     
  0.650
LOC101169066
Phosphatidylinositol-4-phosphate 5-kinase, type I, gamma b.
     
  0.650
PIP4K2B
Phosphatidylinositol-5-phosphate 4-kinase type 2 beta.
     
  0.650
LOC101173168
Phosphatidylinositol-4-phosphate 5-kinase, type I, alpha, b.
     
  0.650
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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