LOC101162819 protein (Oryzias latipes) - STRING interaction network

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Score

LOC101162819

Zinc finger CCCH-type containing 13. (1782 aa)

Predicted Functional Partners:

wtap

0.993

thoc1

0.969

thoc3

0.969

thoc5

0.966

virma

0.958

thoc7

0.951

thoc6

0.951

dhx16

0.922

polr2a

0.914

med4

0.913

Your Current Organism:

Oryzias latipes

NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC101162819	dhx16	ENSORLP00000006556	ENSORLP00000020005	Zinc finger CCCH-type containing 13.	DEAH (Asp-Glu-Ala-His) box polypeptide 16.	0.922
LOC101162819	med4	ENSORLP00000006556	ENSORLP00000017647	Zinc finger CCCH-type containing 13.	Mediator of RNA polymerase II transcription subunit 4; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	0.913
LOC101162819	polr2a	ENSORLP00000006556	ENSORLP00000038121	Zinc finger CCCH-type containing 13.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.914
LOC101162819	thoc1	ENSORLP00000006556	ENSORLP00000022056	Zinc finger CCCH-type containing 13.	THO complex 1.	0.969
LOC101162819	thoc3	ENSORLP00000006556	ENSORLP00000042316	Zinc finger CCCH-type containing 13.	THO complex 3.	0.969
LOC101162819	thoc5	ENSORLP00000006556	ENSORLP00000010538	Zinc finger CCCH-type containing 13.	THO complex 5.	0.966
LOC101162819	thoc6	ENSORLP00000006556	ENSORLP00000039313	Zinc finger CCCH-type containing 13.	THO complex 6.	0.951
LOC101162819	thoc7	ENSORLP00000006556	ENSORLP00000028126	Zinc finger CCCH-type containing 13.	THO complex 7.	0.951
LOC101162819	virma	ENSORLP00000006556	ENSORLP00000011219	Zinc finger CCCH-type containing 13.	Vir like m6A methyltransferase associated.	0.958
LOC101162819	wtap	ENSORLP00000006556	ENSORLP00000016592	Zinc finger CCCH-type containing 13.	WT1 associated protein.	0.993
dhx16	LOC101162819	ENSORLP00000020005	ENSORLP00000006556	DEAH (Asp-Glu-Ala-His) box polypeptide 16.	Zinc finger CCCH-type containing 13.	0.922
med4	LOC101162819	ENSORLP00000017647	ENSORLP00000006556	Mediator of RNA polymerase II transcription subunit 4; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	Zinc finger CCCH-type containing 13.	0.913
med4	polr2a	ENSORLP00000017647	ENSORLP00000038121	Mediator of RNA polymerase II transcription subunit 4; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.839
polr2a	LOC101162819	ENSORLP00000038121	ENSORLP00000006556	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Zinc finger CCCH-type containing 13.	0.914
polr2a	med4	ENSORLP00000038121	ENSORLP00000017647	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Mediator of RNA polymerase II transcription subunit 4; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	0.839
polr2a	wtap	ENSORLP00000038121	ENSORLP00000016592	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	WT1 associated protein.	0.558
thoc1	LOC101162819	ENSORLP00000022056	ENSORLP00000006556	THO complex 1.	Zinc finger CCCH-type containing 13.	0.969
thoc1	thoc3	ENSORLP00000022056	ENSORLP00000042316	THO complex 1.	THO complex 3.	0.999
thoc1	thoc5	ENSORLP00000022056	ENSORLP00000010538	THO complex 1.	THO complex 5.	0.999
thoc1	thoc6	ENSORLP00000022056	ENSORLP00000039313	THO complex 1.	THO complex 6.	0.995