STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2LKK7_ORYLATransmembrane protein 126A. (198 aa)    
Predicted Functional Partners:
ecsit
ECSIT signalling integrator.
     
 0.932
opa3
Outer mitochondrial membrane lipid metabolism regulator OPA3.
      
 0.839
rtn4ip1
Reticulon 4 interacting protein 1.
   
  
 0.740
mettl27
Methyltransferase like 27.
   
 
 0.729
mettl17
Methyltransferase like 17.
      
 0.721
tmub1
Transmembrane and ubiquitin-like domain containing 1.
      
 0.717
aasdhppt
Aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase.
   
  
 0.700
acad9
Acyl-CoA dehydrogenase family, member 9.
     
 0.700
tmem41a
Transmembrane protein 41aa.
      
 0.691
LOC101174769
Transmembrane protein 41ab.
      
 0.691
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.