STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2LKK7_ORYLATransmembrane protein 126A. (198 aa)    
Predicted Functional Partners:
ecsit
ECSIT signalling integrator.
     
 0.732
LOC111946835
NADH:ubiquinone oxidoreductase complex assembly factor 1.
   
 
 0.686
LOC101170556
NADH:ubiquinone oxidoreductase complex assembly factor 1.
   
 
 0.686
acadvl
Acyl-CoA dehydrogenase very long chain.
   
 
 0.659
acad9
Acyl-CoA dehydrogenase family, member 9.
   
 
 0.659
LOC101173711
Uncharacterized protein.
   
 
 0.591
mettl27
Methyltransferase like 27.
   
 
 0.573
ndufb6
NADH:ubiquinone oxidoreductase subunit B.
   
 
 0.565
rtn4ip1
Reticulon 4 interacting protein 1.
   
  
 0.565
opa3
Outer mitochondrial membrane lipid metabolism regulator OPA3.
      
 0.560
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.