vps26b protein (Oryzias latipes) - STRING interaction network

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Predicted Interactions

gene neighborhood

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Score

vps26b

VPS26, retromer complex component B. (333 aa)

Predicted Functional Partners:

vps29

0.990

vps26a

0.976

snx12

0.965

snx3

0.965

tbc1d5

0.904

LOC101163736

0.853

snx2

0.853

snx10

0.819

snx11

0.819

ENSORLP00000042864

0.819

Your Current Organism:

Oryzias latipes

NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSORLP00000042864	vps26a	ENSORLP00000042864	ENSORLP00000012805	Sorting nexin 10a.	VPS26, retromer complex component A.	0.819
ENSORLP00000042864	vps26b	ENSORLP00000042864	ENSORLP00000006560	Sorting nexin 10a.	VPS26, retromer complex component B.	0.819
ENSORLP00000042864	vps29	ENSORLP00000042864	ENSORLP00000022447	Sorting nexin 10a.	Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.	0.734
LOC101163736	snx12	ENSORLP00000002453	ENSORLP00000002261	Sorting nexin 1a.	Sorting nexin 12.	0.588
LOC101163736	snx2	ENSORLP00000002453	ENSORLP00000043960	Sorting nexin 1a.	Sorting nexin 2.	0.500
LOC101163736	snx3	ENSORLP00000002453	ENSORLP00000016846	Sorting nexin 1a.	Sorting nexin 3.	0.588
LOC101163736	vps26a	ENSORLP00000002453	ENSORLP00000012805	Sorting nexin 1a.	VPS26, retromer complex component A.	0.860
LOC101163736	vps26b	ENSORLP00000002453	ENSORLP00000006560	Sorting nexin 1a.	VPS26, retromer complex component B.	0.853
LOC101163736	vps29	ENSORLP00000002453	ENSORLP00000022447	Sorting nexin 1a.	Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.	0.931
snx10	vps26a	ENSORLP00000009622	ENSORLP00000012805	Sorting nexin 10b.	VPS26, retromer complex component A.	0.819
snx10	vps26b	ENSORLP00000009622	ENSORLP00000006560	Sorting nexin 10b.	VPS26, retromer complex component B.	0.819
snx10	vps29	ENSORLP00000009622	ENSORLP00000022447	Sorting nexin 10b.	Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.	0.734
snx11	vps26a	ENSORLP00000038543	ENSORLP00000012805	PX domain-containing protein.	VPS26, retromer complex component A.	0.819
snx11	vps26b	ENSORLP00000038543	ENSORLP00000006560	PX domain-containing protein.	VPS26, retromer complex component B.	0.819
snx11	vps29	ENSORLP00000038543	ENSORLP00000022447	PX domain-containing protein.	Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.	0.734
snx12	LOC101163736	ENSORLP00000002261	ENSORLP00000002453	Sorting nexin 12.	Sorting nexin 1a.	0.588
snx12	snx2	ENSORLP00000002261	ENSORLP00000043960	Sorting nexin 12.	Sorting nexin 2.	0.588
snx12	snx3	ENSORLP00000002261	ENSORLP00000016846	Sorting nexin 12.	Sorting nexin 3.	0.901
snx12	tbc1d5	ENSORLP00000002261	ENSORLP00000038751	Sorting nexin 12.	TBC1 domain family, member 5.	0.435
snx12	vps26a	ENSORLP00000002261	ENSORLP00000012805	Sorting nexin 12.	VPS26, retromer complex component A.	0.961