STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cpb2Carboxypeptidase B2 (plasma). (402 aa)    
Predicted Functional Partners:
serpind1
Serpin peptidase inhibitor, clade D (heparin cofactor), member 1; Belongs to the serpin family.
   
 
 0.714
proc
Protein C (inactivator of coagulation factors Va and VIIIa), a.
   
 
 0.693
c5
Uncharacterized protein.
   
 0.661
stil
SERPIN domain-containing protein; Belongs to the serpin family.
   
 
 0.659
ENSORLP00000042189
Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.
   
 
 0.653
C8A
Complement C8 alpha chain.
   
  
 0.594
ENSORLP00000034547
Coagulation factor X.
   
 
 0.586
LOC101163251
6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2a.
     
 0.575
LOC101164225
6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2b.
     
 0.575
tryp
Trypsinogen; Belongs to the peptidase S1 family.
   
 
 0.558
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.