STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cpb2Carboxypeptidase B2 (plasma). (402 aa)    
Predicted Functional Partners:
LOC101168926
XK-related protein.
      
 0.845
cpe
Carboxypeptidase E.
     
 0.791
serpind1
Serpin peptidase inhibitor, clade D (heparin cofactor), member 1; Belongs to the serpin family.
   
 
 0.760
agt
Angiotensinogen; Belongs to the serpin family.
   
 
 0.737
stil
SERPIN domain-containing protein; Belongs to the serpin family.
   
 
 0.725
proc
Protein C (inactivator of coagulation factors Va and VIIIa), a.
   
 
 0.688
cpn1
Carboxypeptidase N, polypeptide 1.
   
 
 0.639
c8g
Complement component 8, gamma polypeptide; Belongs to the calycin superfamily. Lipocalin family.
   
  
 0.525
usp40
Ubiquitin specific peptidase 40; Belongs to the peptidase C19 family.
    
 
 0.518
c5
Uncharacterized protein.
   
 0.518
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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