STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101162519O-acyltransferase. (530 aa)    
Predicted Functional Partners:
dhcr24
24-dehydrocholesterol reductase.
     
 0.922
dhcr7
7-dehydrocholesterol reductase.
    
 0.921
soat1
O-acyltransferase.
  
  
 
0.902
LOC101160349
Cholesterol 7-alpha-monooxygenase; Belongs to the cytochrome P450 family.
   
 
 0.889
LOC101168135
Cholesterol 25-hydroxylase like 2; Belongs to the sterol desaturase family.
   
 0.839
LOC101156734
Cholesterol 25-hydroxylase like 1, tandem duplicate 2; Belongs to the sterol desaturase family.
   
 0.839
LOC101157212
Cholesterol 25-hydroxylase like 1, tandem duplicate 1; Belongs to the sterol desaturase family.
   
 0.839
ch25h
Cholesterol 25-hydroxylase; Belongs to the sterol desaturase family.
   
 0.839
LOC101157865
Cholesterol 25-hydroxylase like 3; Belongs to the sterol desaturase family.
   
 0.835
LOC101165021
Uncharacterized protein.
    
 0.829
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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