STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
grem2Gremlin 2, DAN family BMP antagonist a. (192 aa)    
Predicted Functional Partners:
Grem1
Gremlin 1a, DAN family BMP antagonist.
  
  
 
0.905
GREM1
Gremlin.
  
  
 
0.903
bmp4
Bone morphogenetic protein 4.
    
 0.811
bmp2
TGF_BETA_2 domain-containing protein.
    
 0.803
LOC101163346
Bone morphogenetic protein 16.
    
 0.803
bmp6
Bone morphogenetic protein 6.
    
 0.724
bmp5
Bone morphogenetic protein 5.
    
 0.724
LOC101173146
Bone morphogenetic protein 7b.
    
 0.724
gdf5
Growth differentiation factor 5.
    
 0.723
LOC101171064
Growth differentiation factor 6a.
    
 0.723
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.