STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
duox1Dual oxidase. (1477 aa)    
Predicted Functional Partners:
LOC101170577
Cytochrome b-245 light chain; Critical component of the membrane-bound oxidase of phagocytes that generates superoxide. Associates with NOX3 to form a functional NADPH oxidase constitutively generating superoxide.
   
 0.930
ENSORLP00000039308
Dual oxidase 2.
 
 
 0.914
ncf1
Neutrophil cytosolic factor 1.
   
 0.888
ncf4
Neutrophil cytosolic factor 4.
   
 0.844
ncf2
Neutrophil cytosolic factor 2.
   
 0.830
nox4
FAD-binding FR-type domain-containing protein.
     
0.803
H2MTT2_ORYLA
NADPH oxidase activator 1.
   
 0.763
nox1
NADPH oxidase 1.
     
0.659
LOC101167081
NADPH oxidase organizer 1b.
   
 0.656
LOC101157756
Cytochrome b-245, beta polypeptide (chronic granulomatous disease).
     
0.629
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.