Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101170305Uncharacterized protein. (641 aa)    
Predicted Functional Partners:
H2LWC6_ORYLA
Uncharacterized protein.
      
 0.636
samd10
Sterile alpha motif domain containing 10b.
      
 0.636
arhgap45
Rho GTPase activating protein 45b.
      
 0.571
fhl3
Four and a half LIM domains 3a.
      
 0.563
LOC101169742
Rho GTPase activating protein 27.
      
 0.498
rassf4
Ras association domain family member 4a.
      
 0.498
GRTP1
Growth hormone regulated TBC protein 1b.
      
 0.490
LOC101170664
Myosin IF; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
      
 0.464
LOC101163201
Ral guanine nucleotide dissociation stimulator-like 2.
      
 0.464
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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