Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H2LKX7_ORYLADynein light chain. (110 aa)    
Predicted Functional Partners:
ENSORLP00000040962
Uncharacterized protein.
  
     0.510
ENSORLP00000042546
Uncharacterized protein.
  
     0.501
ENSORLP00000038944
Uncharacterized protein.
  
     0.478
ENSORLP00000040162
Uncharacterized protein.
  
     0.466
ENSORLP00000029713
Uncharacterized protein.
  
     0.463
ENSORLP00000034045
Uncharacterized protein.
  
     0.463
ENSORLP00000031688
Uncharacterized protein.
  
     0.412
ENSORLP00000041400
Uncharacterized protein.
  
     0.404
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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