STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101162144Hexosyltransferase. (353 aa)    
Predicted Functional Partners:
st3gal5
ST3 beta-galactoside alpha-2,3-sialyltransferase 5; Belongs to the glycosyltransferase 29 family.
      
 0.667
sult6b1
Sulfotransferase; Belongs to the sulfotransferase 1 family.
      
 0.508
slc35c1
Solute carrier family 35 member C1.
      
 0.486
gm2a
GM2 ganglioside activator.
   
  
 0.469
st3gal2
Uncharacterized protein; Belongs to the glycosyltransferase 29 family.
      
 0.464
st3gal1
Alpha-2,3-sialyltransferase ST3Gal I; Belongs to the glycosyltransferase 29 family.
      
 0.464
rpl11
Ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.
   
    0.407
maats1
MYCBP-associated, testis expressed 1.
     
 0.400
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.