Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
agtpbp1ATP/GTP binding protein 1. (1237 aa)    
Predicted Functional Partners:
ttll4
Tubulin tyrosine ligase-like family, member 4.
    
 
 0.819
Mrps27
Mitochondrial ribosomal protein S27.
     
 0.708
pi4k2a
Phosphatidylinositol 4-kinase type 2 alpha.
      
 0.656
smdt1
Single-pass membrane protein with aspartate-rich tail 1a.
      
 0.651
suds3
SDS3 homolog, SIN3A corepressor complex component.
      
 0.625
LOC101167609
Solute carrier family 25 member 42; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.621
SLC25A42
Solute carrier family 25 member 42; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.621
Mcu
Mitochondrial calcium uniporter.
      
 0.616
ireb2
Iron-responsive element binding protein 2.
      
 0.613
hectd1
HECT domain containing 1.
    
   0.600
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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