LOC101162934 protein (Oryzias latipes) - STRING interaction network

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Score

LOC101162934

Heterogeneous nuclear ribonucleoprotein A/Ba. (345 aa)

Predicted Functional Partners:

LOC101163660

0.737

LOC100049528

0.726

LOC101170313

0.676

ncbp2

0.655

fau

0.629

ENSORLP00000034025

0.611

H2M705_ORYLA

0.608

NCBP1

0.584

LOC105357348

0.579

hnrnph1

0.577

Your Current Organism:

Oryzias latipes

NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSORLP00000034025	H2M705_ORYLA	ENSORLP00000034025	ENSORLP00000014255	RRM domain-containing protein.	TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	0.454
ENSORLP00000034025	LOC100049528	ENSORLP00000034025	ENSORLP00000026065	RRM domain-containing protein.	Serine and arginine rich splicing factor 2a.	0.824
ENSORLP00000034025	LOC101162934	ENSORLP00000034025	ENSORLP00000006716	RRM domain-containing protein.	Heterogeneous nuclear ribonucleoprotein A/Ba.	0.611
ENSORLP00000034025	LOC101163660	ENSORLP00000034025	ENSORLP00000001513	RRM domain-containing protein.	RRM domain-containing protein.	0.832
ENSORLP00000034025	NCBP1	ENSORLP00000034025	ENSORLP00000026641	RRM domain-containing protein.	Nuclear cap binding protein subunit 1.	0.810
ENSORLP00000034025	hnrnph1	ENSORLP00000034025	ENSORLP00000008709	RRM domain-containing protein.	Heterogeneous nuclear ribonucleoprotein H1.	0.482
ENSORLP00000034025	ncbp2	ENSORLP00000034025	ENSORLP00000014087	RRM domain-containing protein.	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	0.826
H2M705_ORYLA	ENSORLP00000034025	ENSORLP00000014255	ENSORLP00000034025	TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	RRM domain-containing protein.	0.454
H2M705_ORYLA	LOC100049528	ENSORLP00000014255	ENSORLP00000026065	TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	Serine and arginine rich splicing factor 2a.	0.637
H2M705_ORYLA	LOC101162934	ENSORLP00000014255	ENSORLP00000006716	TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	Heterogeneous nuclear ribonucleoprotein A/Ba.	0.608
H2M705_ORYLA	LOC101163660	ENSORLP00000014255	ENSORLP00000001513	TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	RRM domain-containing protein.	0.637
H2M705_ORYLA	LOC101170313	ENSORLP00000014255	ENSORLP00000015569	TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	ELAV-like protein; Belongs to the RRM elav family.	0.494
H2M705_ORYLA	LOC105357348	ENSORLP00000014255	ENSORLP00000034232	TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	Serine and arginine rich splicing factor 5b.	0.454
H2M705_ORYLA	NCBP1	ENSORLP00000014255	ENSORLP00000026641	TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	Nuclear cap binding protein subunit 1.	0.564
H2M705_ORYLA	hnrnph1	ENSORLP00000014255	ENSORLP00000008709	TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	Heterogeneous nuclear ribonucleoprotein H1.	0.600
H2M705_ORYLA	ncbp2	ENSORLP00000014255	ENSORLP00000014087	TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	0.585
LOC100049528	ENSORLP00000034025	ENSORLP00000026065	ENSORLP00000034025	Serine and arginine rich splicing factor 2a.	RRM domain-containing protein.	0.824
LOC100049528	H2M705_ORYLA	ENSORLP00000026065	ENSORLP00000014255	Serine and arginine rich splicing factor 2a.	TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	0.637
LOC100049528	LOC101162934	ENSORLP00000026065	ENSORLP00000006716	Serine and arginine rich splicing factor 2a.	Heterogeneous nuclear ribonucleoprotein A/Ba.	0.726
LOC100049528	LOC105357348	ENSORLP00000026065	ENSORLP00000034232	Serine and arginine rich splicing factor 2a.	Serine and arginine rich splicing factor 5b.	0.759