STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kank2KN motif and ankyrin repeat domains 2. (1001 aa)    
Predicted Functional Partners:
LOC101166279
Rhomboid 5 homolog 1b (Drosophila).
      
 0.811
LOC101173385
Kinesin family member 21A; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 
 0.775
KIF21A
Kinesin family member 21A; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 
 0.775
nprl3
NPR3-like, GATOR1 complex subunit.
      
 0.741
ngb
Neuroglobin; Belongs to the globin family.
   
 
 0.700
lcmt1
Leucine carboxyl methyltransferase 1; Methylates the carboxyl group of the C-terminal leucine residue of protein phosphatase 2A catalytic subunits to form alpha- leucine ester residues; Belongs to the methyltransferase superfamily. LCMT family.
      
 0.690
rhbdf1
Rhomboid 5 homolog 1a (Drosophila).
      
 0.668
mgrn1
Mahogunin, ring finger 1b.
    
 
 0.625
aqp8
Uncharacterized protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.
   
 0.618
aanat
N-acetyltransferase domain-containing protein.
    
 
 0.615
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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