Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
kank2KN motif and ankyrin repeat domains 2. (1001 aa)    
Predicted Functional Partners:
nprl3
NPR3-like, GATOR1 complex subunit.
      
 0.889
LOC101166279
Rhomboid 5 homolog 1b (Drosophila).
      
 0.835
lcmt1
Leucine carboxyl methyltransferase 1; Methylates the carboxyl group of the C-terminal leucine residue of protein phosphatase 2A catalytic subunits to form alpha- leucine ester residues; Belongs to the methyltransferase superfamily. LCMT family.
      
 0.811
LOC101159508
Dedicator of cytokinesis 6; Belongs to the DOCK family.
 
 
  
 0.791
elavl3
ELAV-like protein; Belongs to the RRM elav family.
   
  
 0.785
LOC101173385
Kinesin family member 21A; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 
 0.782
KIF21A
Kinesin family member 21A; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 
 0.782
mgrn1
Mahogunin, ring finger 1b.
    
 
 0.761
spc24
SPC24 component of NDC80 kinetochore complex.
    
 0.735
rhbdf1
Rhomboid 5 homolog 1a (Drosophila).
      
 0.731
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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