Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC105353898Cortexin 1. (96 aa)    
Predicted Functional Partners:
sult4a1
Sulfotransferase; Belongs to the sulfotransferase 1 family.
   
  
 0.762
frrs1l
Ferric-chelate reductase 1-like.
   
  
 0.725
sh2d5
SH2 domain containing 5.
      
 0.651
LOC101166386
Fructosamine 3 kinase related protein; Belongs to the fructosamine kinase family.
      
 0.623
aste1
XPG_I_2 domain-containing protein.
      
 0.612
dnajc25
DnaJ (Hsp40) homolog, subfamily C, member 25.
      
 0.605
pde6g
Phosphodiesterase 6G, cGMP-specific, rod, gamma, paralog b.
      
 0.539
pdzrn4
PDZ domain containing ring finger 4.
      
 0.526
Tmem108
Uncharacterized protein.
      
 0.499
tmem108
Uncharacterized protein.
      
 0.499
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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