Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC101159508Dedicator of cytokinesis 6; Belongs to the DOCK family. (2029 aa)    
Predicted Functional Partners:
kank2
KN motif and ankyrin repeat domains 2.
 
 
  
 0.791
elavl3
ELAV-like protein; Belongs to the RRM elav family.
      
 0.778
mgrn1
Mahogunin, ring finger 1b.
    
 
 0.766
nprl3
NPR3-like, GATOR1 complex subunit.
      
 0.719
rhbdf1
Rhomboid 5 homolog 1a (Drosophila).
   
  
 0.715
LOC101166279
Rhomboid 5 homolog 1b (Drosophila).
   
  
 0.709
CDC42
Cell division cycle 42.
   
 0.686
LOC101164400
Uncharacterized protein.
   
 0.686
lcmt1
Leucine carboxyl methyltransferase 1; Methylates the carboxyl group of the C-terminal leucine residue of protein phosphatase 2A catalytic subunits to form alpha- leucine ester residues; Belongs to the methyltransferase superfamily. LCMT family.
      
 0.682
Rhoh
Ras homolog family member H.
   
 0.681
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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