Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-expression
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[Homology]
Score
GOLM1Golgi membrane protein 1. (406 aa)    
Predicted Functional Partners:
naa35
N(alpha)-acetyltransferase 35, NatC auxiliary subunit.
      
 0.727
LOC101170172
Tetraspanin.
   
  
 0.634
braf
B-Raf proto-oncogene, serine/threonine kinase.
      
 0.633
LOC101167327
FAM20C golgi associated secretory pathway kinase.
    
  0.596
LOC101163577
FAM20C golgi associated secretory pathway kinase a.
    
  0.596
LOC101166973
Golgi phosphoprotein 3.
    
 
 0.569
golph3
Uncharacterized protein.
    
 
 0.569
LOC101174246
Tetraspanin.
   
  
 0.549
fam20a
FAM20A golgi associated secretory pathway pseudokinase.
     
  0.529
LOC101164063
Tetraspanin.
   
  
 0.520
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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