STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
azi25-azacytidine induced 2. (396 aa)    
Predicted Functional Partners:
ikbkg
Inhibitor of nuclear factor kappa B kinase regulatory subunit gamma.
     
 0.917
tank
TRAF family member-associated NFKB activator.
   
 
 0.908
LOC101172593
Tumor necrosis factor a (TNF superfamily, member 2).
    
   0.904
LOC101164514
SKICH domain-containing protein.
    
 
 0.874
ikbke
Inhibitor of nuclear factor kappa B kinase subunit epsilon.
   
 
 0.859
tbk1
TANK-binding kinase 1.
   
 
 0.859
tax1bp1
Tax1 (human T-cell leukemia virus type I) binding protein 1b.
    
 
 0.841
LOC101173317
Tax1 (human T-cell leukemia virus type I) binding protein 1a.
    
 
 0.817
Tbkbp1
Uncharacterized protein.
     
  0.800
cmc1
COX assembly mitochondrial protein.
      
 0.674
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.