STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
prkcshProtein kinase C substrate 80K-H. (530 aa)    
Predicted Functional Partners:
ganab
Glucosidase, alpha; neutral AB; Belongs to the glycosyl hydrolase 31 family.
   
 0.997
sec63
SEC63 homolog, protein translocation regulator.
      
 0.690
hsp90b1
Heat shock protein 90, beta (grp94), member 1.
   
 0.657
LOC101157703
Uncharacterized protein; Belongs to the glycosyl hydrolase 31 family.
   
 0.640
LOC101175232
Myogenesis regulating glycosidase (putative); Belongs to the glycosyl hydrolase 31 family.
   
 0.640
gaa
Glucosidase, alpha; acid (Pompe disease, glycogen storage disease type II); Belongs to the glycosyl hydrolase 31 family.
   
 0.640
si
Uncharacterized protein.
   
 0.640
ENSORLP00000027656
Uncharacterized protein.
   
 0.640
LOC105357953
Si:ch211-236l14.4; Belongs to the glycosyl hydrolase 31 family.
   
 0.640
LOC101169174
Si:ch73-12o23.1; Belongs to the glycosyl hydrolase 31 family.
   
 0.640
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.