Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
brms1BRMS1 transcriptional repressor and anoikis regulator. (273 aa)    
Predicted Functional Partners:
sap30l
Sap30-like.
   
 0.998
LOC101172976
SIN3-HDAC complex associated factor.
    
 0.997
suds3
SDS3 homolog, SIN3A corepressor complex component.
    
 0.984
LOC110017569
SIN3-HDAC complex associated factor, like.
    
 0.983
sin3a
SIN3 transcription regulator family member Aa.
   
 0.974
sin3b
SIN3 transcription regulator family member B.
   
 0.974
LOC101163723
SIN3 transcription regulator family member Ab.
   
 0.974
phf12
PHD finger protein 12b.
    
 0.958
sap130
Sin3A-associated protein a.
    
 0.937
LOC101161599
BRMS1 like transcriptional repressor b.
  
 
 
0.913
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.