STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101164783ZP domain-containing protein. (525 aa)    
Predicted Functional Partners:
H2MVD1_ORYLA
ZP domain-containing protein.
  
 
 0.687
LOC100049331
Zona pellucida protein AX 1.
   
 
 0.661
LOC101170068
ZP domain-containing protein.
   
 
 0.661
LOC100049332
Uncharacterized protein.
   
 
 0.624
LOC101157350
ZP domain-containing protein.
   
 
 0.624
LOC101164099
ZP domain-containing protein.
   
 
 0.621
LOC101162077
ZP domain-containing protein.
   
 
 0.621
LOC100049191
Uncharacterized protein.
   
 
 0.568
LOC100049432
Uncharacterized protein.
   
 
 0.568
fam107b
Family with sequence similarity 107 member B.
   
 
 0.568
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.