Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
zpld1Zona pellucida-like domain containing 1a. (413 aa)    
Predicted Functional Partners:
bricd5
BRICHOS domain containing 5.
      
 0.699
LOC101165671
Cerebellin 12.
      
 0.680
LOC101158493
Otolith matrix protein.
      
 0.554
LOC101161894
Lipoxygenase homology domains 1b.
      
 0.485
loxhd1
Lipoxygenase homology domains 1a.
      
 0.485
LOC101166797
Parvalbumin 8; Belongs to the parvalbumin family.
  
     0.466
skor2
SKI family transcriptional corepressor 2.
      
 0.464
gb-2
Embryonic beta-type globin; Belongs to the globin family.
  
     0.414
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.