Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC101169716Microtubule-associated protein 6b. (374 aa)    
Predicted Functional Partners:
LOC101170553
NME/NM23 family member 8; Belongs to the NDK family.
    
 0.503
tmem106b
Transmembrane protein 106Ba.
    
 0.478
efhc2
EF-hand domain (C-terminal) containing 2.
    
 
 0.469
abcb7
ATP-binding cassette, sub-family B (MDR/TAP), member 7.
    
 
 0.436
ENSORLP00000031372
Tyrosine-protein phosphatase domain-containing protein.
    
 0.432
ENSORLP00000034279
Uncharacterized protein.
    
 0.432
ankef1
Ankyrin repeat and EF-hand domain containing 1a.
    
 0.422
rasl11a
RAS-like, family 11, member A.
    
 0.421
LOC101156486
Ankyrin repeat domain 24.
    
 0.402
prok1
Prokineticin 1.
     
 0.400
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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